Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snd1Q78PY7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snd1Q78PY7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snd1Q78PY7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Gm11434-201ENSMUST00000122379 629 ntBASIC15.31■□□□□ 0.04
Snd1Q78PY7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Gm27301-201ENSMUST00000184012 127 ntBASIC15.31■□□□□ 0.04
Snd1Q78PY7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snd1Q78PY7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.3■□□□□ 0.04
Snd1Q78PY7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.3■□□□□ 0.04
Snd1Q78PY7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Gm2451-201ENSMUST00000199447 999 ntBASIC15.3■□□□□ 0.04
Snd1Q78PY7 Gm10290-201ENSMUST00000200451 999 ntBASIC15.3■□□□□ 0.04
Snd1Q78PY7 Olfr286-202ENSMUST00000205305 969 ntBASIC15.3■□□□□ 0.04
Snd1Q78PY7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snd1Q78PY7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.29■□□□□ 0.04
Snd1Q78PY7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gm14701-201ENSMUST00000117156 348 ntBASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snd1Q78PY7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snd1Q78PY7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snd1Q78PY7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms