Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.79□□□□□ -0.52
Rif1Q6PR54 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Gm7029-201ENSMUST00000173226 450 ntBASIC11.78□□□□□ -0.52
Rif1Q6PR54 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Gm37230-201ENSMUST00000194491 818 ntBASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Gm13097-201ENSMUST00000210722 397 ntBASIC11.78□□□□□ -0.52
Rif1Q6PR54 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.78□□□□□ -0.52
Rif1Q6PR54 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm24830-201ENSMUST00000102024 166 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm25890-201ENSMUST00000177643 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm22614-201ENSMUST00000178300 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm22042-201ENSMUST00000082989 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm26232-201ENSMUST00000083360 166 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm24136-201ENSMUST00000083374 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Gm26110-201ENSMUST00000083971 165 ntBASIC11.77□□□□□ -0.52
Rif1Q6PR54 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.77□□□□□ -0.53
Rif1Q6PR54 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.77□□□□□ -0.53
Rif1Q6PR54 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.77□□□□□ -0.53
Rif1Q6PR54 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms