Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn1Q6A0D4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Gm6983-201ENSMUST00000214912 628 ntBASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rftn1Q6A0D4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm15371-201ENSMUST00000117057 784 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm15198-201ENSMUST00000117283 177 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm8927-201ENSMUST00000181978 981 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm3222-201ENSMUST00000071282 990 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
Rftn1Q6A0D4 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.22□□□□□ -0.13
Rftn1Q6A0D4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rftn1Q6A0D4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rftn1Q6A0D4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms