Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.61■□□□□ 0.25
Col11a2Q64739 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Col11a2Q64739 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col11a2Q64739 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm7857-201ENSMUST00000117957 358 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm14208-201ENSMUST00000119645 678 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm13316-201ENSMUST00000140537 691 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm22334-201ENSMUST00000158070 133 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Mir6927-201ENSMUST00000184494 71 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col11a2Q64739 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col11a2Q64739 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col11a2Q64739 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.6■□□□□ 0.25
Col11a2Q64739 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Snord83b-201ENSMUST00000104546 94 ntBASIC16.59■□□□□ 0.25
Col11a2Q64739 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Col11a2Q64739 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm2231-201ENSMUST00000125661 612 ntBASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm26185-201ENSMUST00000157692 266 ntBASIC16.59■□□□□ 0.25
Col11a2Q64739 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.59■□□□□ 0.25
Col11a2Q64739 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col11a2Q64739 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a2Q64739 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.58■□□□□ 0.25
Col11a2Q64739 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a2Q64739 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.58■□□□□ 0.24
Col11a2Q64739 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.58■□□□□ 0.24
Col11a2Q64739 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Gm12217-201ENSMUST00000118858 696 ntBASIC16.58■□□□□ 0.24
Col11a2Q64739 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a2Q64739 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.58■□□□□ 0.24
Col11a2Q64739 Gm38317-201ENSMUST00000195564 343 ntBASIC16.58■□□□□ 0.24
Col11a2Q64739 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.58■□□□□ 0.24
Col11a2Q64739 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms