Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
AtmQ62388 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
AtmQ62388 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.98□□□□□ -0.33
AtmQ62388 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.98□□□□□ -0.33
AtmQ62388 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AtmQ62388 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
AtmQ62388 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
AtmQ62388 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
AtmQ62388 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AtmQ62388 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AtmQ62388 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Gm13813-201ENSMUST00000120998 787 ntBASIC12.97□□□□□ -0.33
AtmQ62388 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.97□□□□□ -0.33
AtmQ62388 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.97□□□□□ -0.33
AtmQ62388 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AtmQ62388 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
AtmQ62388 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.97□□□□□ -0.33
AtmQ62388 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AtmQ62388 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AtmQ62388 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Gm12217-201ENSMUST00000118858 696 ntBASIC12.97□□□□□ -0.33
AtmQ62388 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.97□□□□□ -0.33
AtmQ62388 Gm13570-201ENSMUST00000140763 309 ntBASIC12.97□□□□□ -0.33
AtmQ62388 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AtmQ62388 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
AtmQ62388 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.96□□□□□ -0.33
AtmQ62388 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
AtmQ62388 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
AtmQ62388 Gm44545-201ENSMUST00000208262 746 ntBASIC12.96□□□□□ -0.33
AtmQ62388 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.96□□□□□ -0.33
AtmQ62388 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AtmQ62388 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.96□□□□□ -0.34
AtmQ62388 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
AtmQ62388 Gm29608-201ENSMUST00000190444 463 ntBASIC12.96□□□□□ -0.34
AtmQ62388 Gm44100-201ENSMUST00000204329 436 ntBASIC12.96□□□□□ -0.34
AtmQ62388 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.96□□□□□ -0.34
AtmQ62388 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.96□□□□□ -0.34
AtmQ62388 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.96□□□□□ -0.34
AtmQ62388 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms