Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.76□□□□□ -0.53
SspnQ62147 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.76□□□□□ -0.53
SspnQ62147 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SspnQ62147 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.76□□□□□ -0.53
SspnQ62147 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SspnQ62147 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.75□□□□□ -0.53
SspnQ62147 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SspnQ62147 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.75□□□□□ -0.53
SspnQ62147 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SspnQ62147 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
SspnQ62147 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.75□□□□□ -0.53
SspnQ62147 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Gm8000-201ENSMUST00000188378 592 ntBASIC11.75□□□□□ -0.53
SspnQ62147 Gm5264-201ENSMUST00000190584 848 ntBASIC11.75□□□□□ -0.53
SspnQ62147 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.75□□□□□ -0.53
SspnQ62147 Gm20553-201ENSMUST00000204205 844 ntBASIC11.75□□□□□ -0.53
SspnQ62147 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.75□□□□□ -0.53
SspnQ62147 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SspnQ62147 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SspnQ62147 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SspnQ62147 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SspnQ62147 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SspnQ62147 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.74□□□□□ -0.53
SspnQ62147 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.74□□□□□ -0.53
SspnQ62147 Gm6443-201ENSMUST00000203599 874 ntBASIC11.74□□□□□ -0.53
SspnQ62147 AW822252-206ENSMUST00000208904 237 ntBASIC11.74□□□□□ -0.53
SspnQ62147 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SspnQ62147 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms