Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox17Q61473 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox17Q61473 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.15□□□□□ -0.3
Sox17Q61473 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox17Q61473 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sox17Q61473 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox17Q61473 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox17Q61473 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox17Q61473 Gm5479-201ENSMUST00000160578 435 ntBASIC13.15□□□□□ -0.3
Sox17Q61473 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox17Q61473 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox17Q61473 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Sox17Q61473 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox17Q61473 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox17Q61473 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox17Q61473 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox17Q61473 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sox17Q61473 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox17Q61473 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.14□□□□□ -0.31
Sox17Q61473 Birc2-201ENSMUST00000054878 378 ntBASIC13.14□□□□□ -0.31
Sox17Q61473 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox17Q61473 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Sox17Q61473 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sox17Q61473 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox17Q61473 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox17Q61473 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sox17Q61473 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox17Q61473 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox17Q61473 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox17Q61473 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms