Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Six4Q61321 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.13□□□□□ -0.15
Six4Q61321 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.13□□□□□ -0.15
Six4Q61321 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Gm9522-201ENSMUST00000182394 926 ntBASIC14.13□□□□□ -0.15
Six4Q61321 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.13□□□□□ -0.15
Six4Q61321 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Six4Q61321 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six4Q61321 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six4Q61321 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Six4Q61321 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Six4Q61321 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Gm2445-201ENSMUST00000182798 989 ntBASIC14.12□□□□□ -0.15
Six4Q61321 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Six4Q61321 Gm27838-201ENSMUST00000184829 128 ntBASIC14.12□□□□□ -0.15
Six4Q61321 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.12□□□□□ -0.15
Six4Q61321 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.12□□□□□ -0.15
Six4Q61321 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.12□□□□□ -0.15
Six4Q61321 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Six4Q61321 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six4Q61321 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Six4Q61321 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Six4Q61321 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Six4Q61321 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Six4Q61321 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Six4Q61321 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.11□□□□□ -0.15
Six4Q61321 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Gm15321-201ENSMUST00000121290 288 ntBASIC14.11□□□□□ -0.15
Six4Q61321 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six4Q61321 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms