Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm43058-201ENSMUST00000197645 625 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm4607-201ENSMUST00000206649 577 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Gm19208-201ENSMUST00000213861 912 ntBASIC13.54□□□□□ -0.24
Col12a1Q60847 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.54□□□□□ -0.24
Col12a1Q60847 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.53□□□□□ -0.24
Col12a1Q60847 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.53□□□□□ -0.24
Col12a1Q60847 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.53□□□□□ -0.24
Col12a1Q60847 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.53□□□□□ -0.24
Col12a1Q60847 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col12a1Q60847 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col12a1Q60847 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col12a1Q60847 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.52□□□□□ -0.24
Col12a1Q60847 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.52□□□□□ -0.24
Col12a1Q60847 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Gm13097-201ENSMUST00000210722 397 ntBASIC13.52□□□□□ -0.24
Col12a1Q60847 Gm30285-201ENSMUST00000214614 422 ntBASIC13.52□□□□□ -0.24
Col12a1Q60847 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col12a1Q60847 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col12a1Q60847 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.52□□□□□ -0.25
Col12a1Q60847 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.52□□□□□ -0.25
Col12a1Q60847 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Gm11618-201ENSMUST00000117946 267 ntBASIC13.52□□□□□ -0.25
Col12a1Q60847 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col12a1Q60847 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col12a1Q60847 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms