Protein–RNA interactions for Protein: Q60520

Sin3a, Paired amphipathic helix protein Sin3a, mousemouse

Known RBP Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3aQ60520 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sin3aQ60520 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sin3aQ60520 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Sin3aQ60520 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.43■□□□□ 0.7
Sin3aQ60520 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.43■□□□□ 0.7
Sin3aQ60520 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.43■□□□□ 0.7
Sin3aQ60520 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sin3aQ60520 AC166491.1-201ENSMUST00000227053 2308 ntBASIC19.42■□□□□ 0.7
Sin3aQ60520 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Il17rd-203ENSMUST00000225146 3366 ntBASIC19.42■□□□□ 0.7
Sin3aQ60520 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Sin3aQ60520 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Gm29667-201ENSMUST00000190817 490 ntBASIC19.42■□□□□ 0.7
Sin3aQ60520 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Sin3aQ60520 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.42■□□□□ 0.7
Sin3aQ60520 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.42■□□□□ 0.7
Sin3aQ60520 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sin3aQ60520 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sin3aQ60520 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.41■□□□□ 0.7
Sin3aQ60520 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Gm3436-201ENSMUST00000179930 840 ntBASIC19.41■□□□□ 0.7
Sin3aQ60520 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.41■□□□□ 0.7
Sin3aQ60520 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC19.41■□□□□ 0.7
Sin3aQ60520 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sin3aQ60520 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Mir7023-201ENSMUST00000185093 64 ntBASIC19.4■□□□□ 0.7
Sin3aQ60520 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.4■□□□□ 0.7
Sin3aQ60520 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sin3aQ60520 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sin3aQ60520 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms