Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav3-3Q5R1C3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm15372-201ENSMUST00000120729 834 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm6659-201ENSMUST00000174752 547 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm27742-201ENSMUST00000184667 60 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-3Q5R1C3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Gm15165-201ENSMUST00000118140 502 ntBASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-3Q5R1C3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-3Q5R1C3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms