Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gm16215-201ENSMUST00000161990 637 ntBASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gm20445-201ENSMUST00000061905 565 ntBASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hdm4Q4VBF2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Gm21854-201ENSMUST00000179901 471 ntBASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Gm29741-201ENSMUST00000192667 421 ntBASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Gm2423-201ENSMUST00000074863 733 ntBASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hdm4Q4VBF2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hdm4Q4VBF2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
R3hdm4Q4VBF2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hdm4Q4VBF2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.08■□□□□ 0
R3hdm4Q4VBF2 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hdm4Q4VBF2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hdm4Q4VBF2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms