Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gm24589-201ENSMUST00000116692 94 ntBASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim40Q3UWA4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim40Q3UWA4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim40Q3UWA4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms