Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm38341-201ENSMUST00000195357 515 ntBASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm37008-201ENSMUST00000195712 319 ntBASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm2824-203ENSMUST00000226189 1228 ntBASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gm45684-201ENSMUST00000210244 1571 ntBASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Arhgef40Q3UPH7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Gm25927-201ENSMUST00000175058 117 ntBASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Gm18753-201ENSMUST00000201000 566 ntBASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Gm3695-201ENSMUST00000087222 1009 ntBASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Gm6203-201ENSMUST00000209575 1342 ntBASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Arhgef40Q3UPH7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Gm6222-202ENSMUST00000182143 629 ntBASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Olfr284-202ENSMUST00000206647 966 ntBASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Gm4935-201ENSMUST00000221316 1198 ntBASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 AC134335.2-201ENSMUST00000227660 440 ntBASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Gm37297-201ENSMUST00000192974 2384 ntBASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Arhgef40Q3UPH7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Gm38158-201ENSMUST00000194617 339 ntBASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Gm9176-201ENSMUST00000219955 1120 ntBASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Arhgef40Q3UPH7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Gm25261-201ENSMUST00000157416 134 ntBASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Arhgef40Q3UPH7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms