Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Gm27533-201ENSMUST00000183800 152 ntBASIC16.51■□□□□ 0.23
Limch1Q3UH68 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.51■□□□□ 0.23
Limch1Q3UH68 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.51■□□□□ 0.23
Limch1Q3UH68 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Limch1Q3UH68 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gm14719-201ENSMUST00000121891 340 ntBASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gm15487-201ENSMUST00000122373 465 ntBASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.5■□□□□ 0.23
Limch1Q3UH68 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limch1Q3UH68 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gm7488-201ENSMUST00000117148 684 ntBASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gm15957-201ENSMUST00000118893 974 ntBASIC16.49■□□□□ 0.23
Limch1Q3UH68 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gm7775-201ENSMUST00000218871 853 ntBASIC16.49■□□□□ 0.23
Limch1Q3UH68 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limch1Q3UH68 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Limch1Q3UH68 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms