Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gm17968-201ENSMUST00000194902 784 ntBASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm14494-201ENSMUST00000118786 435 ntBASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm16026-204ENSMUST00000162652 683 ntBASIC11.97□□□□□ -0.49
Fndc4Q3TR08 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm5264-201ENSMUST00000190584 848 ntBASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gm45747-201ENSMUST00000212203 999 ntBASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.97□□□□□ -0.49
Fndc4Q3TR08 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm44492-201ENSMUST00000197012 141 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm2451-201ENSMUST00000199447 999 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Gm10290-201ENSMUST00000200451 999 ntBASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fndc4Q3TR08 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms