Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Gm18041-201ENSMUST00000218210 618 ntBASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43aQ3TL54 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm9385-201ENSMUST00000117563 472 ntBASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm12882-201ENSMUST00000121696 517 ntBASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm24513-201ENSMUST00000174964 138 ntBASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
Trim43aQ3TL54 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Gm27397-201ENSMUST00000184997 107 ntBASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim43aQ3TL54 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Gm25925-201ENSMUST00000158314 306 ntBASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms