Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ighv8-14-201ENSMUST00000196781 358 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm9166-201ENSMUST00000120293 561 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm45310-201ENSMUST00000210436 275 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm21998-201ENSMUST00000117552 1308 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm11451-201ENSMUST00000118946 630 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm4868-201ENSMUST00000164138 789 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 App-207ENSMUST00000227737 2827 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm7959-201ENSMUST00000221823 1078 ntBASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm11941-201ENSMUST00000119904 610 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm4482-201ENSMUST00000200876 742 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm12500-202ENSMUST00000186471 2428 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm11637-201ENSMUST00000120601 592 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm4879-201ENSMUST00000122190 1272 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm27627-201ENSMUST00000183644 150 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Mir6973a-201ENSMUST00000183646 78 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm43447-201ENSMUST00000198471 1535 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms