Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col19a1Q0VF58 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm14017-201ENSMUST00000121934 386 ntBASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Mospd4-201ENSMUST00000180618 576 ntBASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm26315-201ENSMUST00000083890 321 ntBASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col19a1Q0VF58 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm12566-201ENSMUST00000121479 359 ntBASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm7809-201ENSMUST00000153199 742 ntBASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.8□□□□□ -0.04
Col19a1Q0VF58 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col19a1Q0VF58 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms