Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm7114-201ENSMUST00000190159 1789 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm13600-201ENSMUST00000117949 744 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm25072-201ENSMUST00000175233 235 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 Mir6546-201ENSMUST00000184460 62 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm28324-201ENSMUST00000187913 264 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm32025-201ENSMUST00000217960 307 ntBASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC21.06■□□□□ 0.96
Col17a1Q07563 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col17a1Q07563 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col17a1Q07563 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col17a1Q07563 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Gm42941-201ENSMUST00000200347 1321 ntBASIC21.05■□□□□ 0.96
Col17a1Q07563 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col17a1Q07563 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col17a1Q07563 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC21.05■□□□□ 0.96
Col17a1Q07563 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC21.05■□□□□ 0.96
Col17a1Q07563 Gm6867-201ENSMUST00000219165 425 ntBASIC21.05■□□□□ 0.96
Col17a1Q07563 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col17a1Q07563 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC21.05■□□□□ 0.96
Col17a1Q07563 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Gm9109-201ENSMUST00000120254 1405 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col17a1Q07563 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col17a1Q07563 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Mir671-201ENSMUST00000102432 98 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC21.04■□□□□ 0.96
Col17a1Q07563 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col17a1Q07563 Gm9873-201ENSMUST00000063891 1097 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.04■□□□□ 0.96
Col17a1Q07563 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col17a1Q07563 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col17a1Q07563 App-207ENSMUST00000227737 2827 ntBASIC21.04■□□□□ 0.96
Col17a1Q07563 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col17a1Q07563 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col17a1Q07563 Mir698-201ENSMUST00000102164 109 ntBASIC21.03■□□□□ 0.96
Col17a1Q07563 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Gm5621-201ENSMUST00000187303 640 ntBASIC21.03■□□□□ 0.96
Col17a1Q07563 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col17a1Q07563 Gm45495-201ENSMUST00000200940 1700 ntBASIC21.03■□□□□ 0.96
Col17a1Q07563 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC21.03■□□□□ 0.96
Col17a1Q07563 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col17a1Q07563 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 AC126444.1-201ENSMUST00000225938 1768 ntBASIC21.02■□□□□ 0.96
Col17a1Q07563 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC21.02■□□□□ 0.96
Col17a1Q07563 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Col17a1Q07563 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC21.02■□□□□ 0.96
Col17a1Q07563 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col17a1Q07563 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Col17a1Q07563 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Col17a1Q07563 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col17a1Q07563 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col17a1Q07563 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 Gm12165-201ENSMUST00000117047 342 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Gm11450-201ENSMUST00000121144 333 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Gm26185-201ENSMUST00000157692 266 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms