Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcr5Q04683 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cxcr5Q04683 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcr5Q04683 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcr5Q04683 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcr5Q04683 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.33□□□□□ -0.28
Cxcr5Q04683 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cxcr5Q04683 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.33□□□□□ -0.28
Cxcr5Q04683 Mzt1-203ENSMUST00000227948 952 ntBASIC13.33□□□□□ -0.28
Cxcr5Q04683 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.33□□□□□ -0.28
Cxcr5Q04683 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcr5Q04683 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.32□□□□□ -0.28
Cxcr5Q04683 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Gm11025-201ENSMUST00000140773 466 ntBASIC13.32□□□□□ -0.28
Cxcr5Q04683 Gm2445-201ENSMUST00000182798 989 ntBASIC13.32□□□□□ -0.28
Cxcr5Q04683 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.32□□□□□ -0.28
Cxcr5Q04683 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcr5Q04683 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Gm2810-201ENSMUST00000118681 990 ntBASIC13.31□□□□□ -0.28
Cxcr5Q04683 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cxcr5Q04683 Gm29310-201ENSMUST00000185468 696 ntBASIC13.31□□□□□ -0.28
Cxcr5Q04683 Gm21825-201ENSMUST00000185728 696 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms