Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.1□□□□□ -0.15
Pfdn6Q03958 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.1□□□□□ -0.15
Pfdn6Q03958 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 AA543401-201ENSMUST00000164248 1269 ntBASIC14.1□□□□□ -0.15
Pfdn6Q03958 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.1□□□□□ -0.15
Pfdn6Q03958 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn6Q03958 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm44335-201ENSMUST00000196879 141 ntBASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm44297-201ENSMUST00000198304 141 ntBASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm44346-201ENSMUST00000198851 141 ntBASIC14.09□□□□□ -0.15
Pfdn6Q03958 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn6Q03958 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn6Q03958 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.08□□□□□ -0.15
Pfdn6Q03958 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn6Q03958 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn6Q03958 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.08□□□□□ -0.16
Pfdn6Q03958 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.08□□□□□ -0.16
Pfdn6Q03958 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.08□□□□□ -0.16
Pfdn6Q03958 Gm10253-201ENSMUST00000194270 940 ntBASIC14.08□□□□□ -0.16
Pfdn6Q03958 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.08□□□□□ -0.16
Pfdn6Q03958 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn6Q03958 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms