Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ldb1P70662 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ldb1P70662 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Matn2-206ENSMUST00000228570 2798 ntBASIC13.98□□□□□ -0.17
Ldb1P70662 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.98□□□□□ -0.17
Ldb1P70662 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ldb1P70662 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.98□□□□□ -0.17
Ldb1P70662 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.98□□□□□ -0.17
Ldb1P70662 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.98□□□□□ -0.17
Ldb1P70662 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.98□□□□□ -0.17
Ldb1P70662 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ldb1P70662 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.98□□□□□ -0.17
Ldb1P70662 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ldb1P70662 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ldb1P70662 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Ldb1P70662 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.97□□□□□ -0.17
Ldb1P70662 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Ldb1P70662 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Gm28630-201ENSMUST00000187806 498 ntBASIC13.97□□□□□ -0.17
Ldb1P70662 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.97□□□□□ -0.17
Ldb1P70662 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ldb1P70662 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ldb1P70662 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ldb1P70662 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ldb1P70662 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Ldb1P70662 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ldb1P70662 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.96□□□□□ -0.17
Ldb1P70662 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.96□□□□□ -0.17
Ldb1P70662 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ldb1P70662 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ldb1P70662 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ldb1P70662 Gm24543-201ENSMUST00000103867 82 ntBASIC13.96□□□□□ -0.17
Ldb1P70662 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.96□□□□□ -0.17
Ldb1P70662 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms