Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim4P70271 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim4P70271 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim4P70271 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim4P70271 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Pdlim4P70271 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pdlim4P70271 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pdlim4P70271 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm5566-201ENSMUST00000116118 459 ntBASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm15920-201ENSMUST00000118998 402 ntBASIC11.7□□□□□ -0.54
Pdlim4P70271 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm44872-201ENSMUST00000207864 420 ntBASIC11.7□□□□□ -0.54
Pdlim4P70271 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.7□□□□□ -0.54
Pdlim4P70271 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdlim4P70271 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdlim4P70271 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.7□□□□□ -0.54
Pdlim4P70271 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.69□□□□□ -0.54
Pdlim4P70271 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.69□□□□□ -0.54
Pdlim4P70271 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.69□□□□□ -0.54
Pdlim4P70271 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdlim4P70271 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim4P70271 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms