Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.32□□□□□ -0.44
Lsm6P62313 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Gm24543-201ENSMUST00000103867 82 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Gm26308-201ENSMUST00000157768 69 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Gm5779-201ENSMUST00000218467 910 ntBASIC12.32□□□□□ -0.44
Lsm6P62313 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.32□□□□□ -0.44
Lsm6P62313 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm6P62313 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm6P62313 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm6P62313 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Gm6415-201ENSMUST00000118488 348 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Gm15653-201ENSMUST00000119247 907 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Gm28630-201ENSMUST00000187806 498 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Lsm6P62313 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.31□□□□□ -0.44
Lsm6P62313 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lsm6P62313 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Lsm6P62313 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm6P62313 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm6P62313 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm6P62313 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm6P62313 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm6P62313 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm6P62313 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.3□□□□□ -0.44
Lsm6P62313 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms