Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.77□□□□□ -0.37
Lsm3P62311 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Lsm3P62311 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Lsm3P62311 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Lsm3P62311 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Lsm3P62311 Gm17808-201ENSMUST00000200859 894 ntBASIC12.77□□□□□ -0.37
Lsm3P62311 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.77□□□□□ -0.37
Lsm3P62311 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm3P62311 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lsm3P62311 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lsm3P62311 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.77□□□□□ -0.37
Lsm3P62311 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Lsm3P62311 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Lsm3P62311 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.76□□□□□ -0.37
Lsm3P62311 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.76□□□□□ -0.37
Lsm3P62311 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Gm6296-201ENSMUST00000222599 943 ntBASIC12.76□□□□□ -0.37
Lsm3P62311 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.76□□□□□ -0.37
Lsm3P62311 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.76□□□□□ -0.37
Lsm3P62311 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm3P62311 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm3P62311 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm3P62311 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.75□□□□□ -0.37
Lsm3P62311 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm3P62311 Gm25925-201ENSMUST00000158314 306 ntBASIC12.75□□□□□ -0.37
Lsm3P62311 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lsm3P62311 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Lsm3P62311 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.75□□□□□ -0.37
Lsm3P62311 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.75□□□□□ -0.37
Lsm3P62311 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.75□□□□□ -0.37
Lsm3P62311 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lsm3P62311 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms