Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lim2P56563 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Gm43703-201ENSMUST00000200523 763 ntBASIC14.04□□□□□ -0.16
Lim2P56563 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.04□□□□□ -0.16
Lim2P56563 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.04□□□□□ -0.16
Lim2P56563 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lim2P56563 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.04□□□□□ -0.16
Lim2P56563 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.03□□□□□ -0.16
Lim2P56563 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lim2P56563 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.03□□□□□ -0.16
Lim2P56563 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.03□□□□□ -0.16
Lim2P56563 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.03□□□□□ -0.16
Lim2P56563 Gm3436-201ENSMUST00000179930 840 ntBASIC14.03□□□□□ -0.16
Lim2P56563 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.03□□□□□ -0.16
Lim2P56563 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.03□□□□□ -0.16
Lim2P56563 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lim2P56563 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Lim2P56563 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lim2P56563 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.03□□□□□ -0.16
Lim2P56563 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lim2P56563 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Lim2P56563 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lim2P56563 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lim2P56563 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.02□□□□□ -0.17
Lim2P56563 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.02□□□□□ -0.17
Lim2P56563 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Lim2P56563 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Lim2P56563 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.02□□□□□ -0.17
Lim2P56563 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.02□□□□□ -0.17
Lim2P56563 Gm33320-201ENSMUST00000192232 530 ntBASIC14.02□□□□□ -0.17
Lim2P56563 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.02□□□□□ -0.17
Lim2P56563 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lim2P56563 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Lim2P56563 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.02□□□□□ -0.17
Lim2P56563 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lim2P56563 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lim2P56563 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lim2P56563 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lim2P56563 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms