Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.02□□□□□ -0.32
CckbrP56481 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CckbrP56481 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Mir1897-201ENSMUST00000122581 272 ntBASIC13.02□□□□□ -0.33
CckbrP56481 Gm17837-201ENSMUST00000186435 985 ntBASIC13.02□□□□□ -0.33
CckbrP56481 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
CckbrP56481 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.02□□□□□ -0.33
CckbrP56481 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CckbrP56481 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CckbrP56481 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CckbrP56481 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.02□□□□□ -0.33
CckbrP56481 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CckbrP56481 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.02□□□□□ -0.33
CckbrP56481 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.01□□□□□ -0.33
CckbrP56481 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.01□□□□□ -0.33
CckbrP56481 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.01□□□□□ -0.33
CckbrP56481 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.01□□□□□ -0.33
CckbrP56481 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.01□□□□□ -0.33
CckbrP56481 Gm8584-201ENSMUST00000171982 758 ntBASIC13.01□□□□□ -0.33
CckbrP56481 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.01□□□□□ -0.33
CckbrP56481 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.01□□□□□ -0.33
CckbrP56481 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Gm46209-201ENSMUST00000217912 553 ntBASIC13.01□□□□□ -0.33
CckbrP56481 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.01□□□□□ -0.33
CckbrP56481 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CckbrP56481 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.01□□□□□ -0.33
CckbrP56481 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CckbrP56481 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13□□□□□ -0.33
CckbrP56481 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13□□□□□ -0.33
CckbrP56481 Gm3436-201ENSMUST00000179930 840 ntBASIC13□□□□□ -0.33
CckbrP56481 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13□□□□□ -0.33
CckbrP56481 AC159114.1-201ENSMUST00000220349 266 ntBASIC13□□□□□ -0.33
CckbrP56481 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13□□□□□ -0.33
CckbrP56481 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CckbrP56481 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CckbrP56481 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
CckbrP56481 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13□□□□□ -0.33
CckbrP56481 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CckbrP56481 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CckbrP56481 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CckbrP56481 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CckbrP56481 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms