Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Mir125a-201ENSMUST00000083545 68 ntBASIC13.92□□□□□ -0.18
Atxn1P54254 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Atxn1P54254 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.92□□□□□ -0.18
Atxn1P54254 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Atxn1P54254 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Atxn1P54254 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.91□□□□□ -0.18
Atxn1P54254 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Atxn1P54254 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.91□□□□□ -0.18
Atxn1P54254 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.91□□□□□ -0.18
Atxn1P54254 Gm27243-201ENSMUST00000183964 521 ntBASIC13.91□□□□□ -0.18
Atxn1P54254 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Atxn1P54254 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.91□□□□□ -0.18
Atxn1P54254 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Atxn1P54254 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atxn1P54254 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.9□□□□□ -0.18
Atxn1P54254 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Gm7399-201ENSMUST00000032395 858 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.9□□□□□ -0.18
Atxn1P54254 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.9□□□□□ -0.18
Atxn1P54254 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Atxn1P54254 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Atxn1P54254 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Atxn1P54254 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Atxn1P54254 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atxn1P54254 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.9□□□□□ -0.19
Atxn1P54254 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atxn1P54254 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atxn1P54254 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.89□□□□□ -0.19
Atxn1P54254 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atxn1P54254 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atxn1P54254 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atxn1P54254 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Atxn1P54254 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atxn1P54254 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms