Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Fdft1P53798 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Fdft1P53798 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Fdft1P53798 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.02□□□□□ -0.16
Fdft1P53798 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.02□□□□□ -0.16
Fdft1P53798 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fdft1P53798 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Fdft1P53798 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.02□□□□□ -0.17
Fdft1P53798 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.02□□□□□ -0.17
Fdft1P53798 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Fdft1P53798 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.02□□□□□ -0.17
Fdft1P53798 Mir6990-201ENSMUST00000183724 91 ntBASIC14.02□□□□□ -0.17
Fdft1P53798 Gm44335-201ENSMUST00000196879 141 ntBASIC14.02□□□□□ -0.17
Fdft1P53798 Gm44297-201ENSMUST00000198304 141 ntBASIC14.02□□□□□ -0.17
Fdft1P53798 Gm44346-201ENSMUST00000198851 141 ntBASIC14.02□□□□□ -0.17
Fdft1P53798 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Fdft1P53798 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Fdft1P53798 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fdft1P53798 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.01□□□□□ -0.17
Fdft1P53798 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Fdft1P53798 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.01□□□□□ -0.17
Fdft1P53798 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.01□□□□□ -0.17
Fdft1P53798 Gm43125-201ENSMUST00000201724 730 ntBASIC14.01□□□□□ -0.17
Fdft1P53798 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
Fdft1P53798 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.01□□□□□ -0.17
Fdft1P53798 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Fdft1P53798 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.01□□□□□ -0.17
Fdft1P53798 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fdft1P53798 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms