Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Shmt1P50431 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Shmt1P50431 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Shmt1P50431 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.82□□□□□ -0.04
Shmt1P50431 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Shmt1P50431 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.82□□□□□ -0.04
Shmt1P50431 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.82□□□□□ -0.04
Shmt1P50431 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Shmt1P50431 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Shmt1P50431 Mir497b-201ENSMUST00000093601 125 ntBASIC14.82□□□□□ -0.04
Shmt1P50431 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.82□□□□□ -0.04
Shmt1P50431 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Shmt1P50431 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Shmt1P50431 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm4804-201ENSMUST00000182234 999 ntBASIC14.81□□□□□ -0.04
Shmt1P50431 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Shmt1P50431 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Shmt1P50431 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Shmt1P50431 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.81□□□□□ -0.04
Shmt1P50431 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Shmt1P50431 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.81□□□□□ -0.04
Shmt1P50431 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shmt1P50431 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.8□□□□□ -0.04
Shmt1P50431 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Gm12859-201ENSMUST00000117834 427 ntBASIC14.8□□□□□ -0.04
Shmt1P50431 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Shmt1P50431 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.8□□□□□ -0.04
Shmt1P50431 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Shmt1P50431 Gm28760-201ENSMUST00000185995 736 ntBASIC14.8□□□□□ -0.04
Shmt1P50431 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.8□□□□□ -0.04
Shmt1P50431 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.8□□□□□ -0.04
Shmt1P50431 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Shmt1P50431 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shmt1P50431 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms