Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.05□□□□□ -0.32
Ptx3P48759 Gm9797-201ENSMUST00000052902 613 ntBASIC13.05□□□□□ -0.32
Ptx3P48759 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.05□□□□□ -0.32
Ptx3P48759 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.05□□□□□ -0.32
Ptx3P48759 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.05□□□□□ -0.32
Ptx3P48759 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ptx3P48759 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptx3P48759 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.04□□□□□ -0.32
Ptx3P48759 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.04□□□□□ -0.32
Ptx3P48759 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.04□□□□□ -0.32
Ptx3P48759 Gm42612-201ENSMUST00000197986 623 ntBASIC13.04□□□□□ -0.32
Ptx3P48759 Gm43170-201ENSMUST00000199827 612 ntBASIC13.04□□□□□ -0.32
Ptx3P48759 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.04□□□□□ -0.32
Ptx3P48759 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ptx3P48759 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptx3P48759 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptx3P48759 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ptx3P48759 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptx3P48759 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptx3P48759 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ptx3P48759 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.03□□□□□ -0.32
Ptx3P48759 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.03□□□□□ -0.32
Ptx3P48759 Gm28760-201ENSMUST00000185995 736 ntBASIC13.03□□□□□ -0.32
Ptx3P48759 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Ptx3P48759 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.03□□□□□ -0.32
Ptx3P48759 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptx3P48759 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptx3P48759 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ptx3P48759 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptx3P48759 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ptx3P48759 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Rubie-203ENSMUST00000227803 2430 ntBASIC13.02□□□□□ -0.32
Ptx3P48759 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ptx3P48759 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ptx3P48759 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptx3P48759 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptx3P48759 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptx3P48759 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.02□□□□□ -0.33
Ptx3P48759 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptx3P48759 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ptx3P48759 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms