Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Sox2P48432 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Sox2P48432 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox2P48432 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.15□□□□□ -0.3
Sox2P48432 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Gm5177-201ENSMUST00000183092 997 ntBASIC13.15□□□□□ -0.3
Sox2P48432 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.15□□□□□ -0.3
Sox2P48432 Gm21362-201ENSMUST00000194272 928 ntBASIC13.15□□□□□ -0.3
Sox2P48432 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox2P48432 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox2P48432 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox2P48432 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sox2P48432 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.14□□□□□ -0.31
Sox2P48432 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox2P48432 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Sox2P48432 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Sox2P48432 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sox2P48432 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.14□□□□□ -0.31
Sox2P48432 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.14□□□□□ -0.31
Sox2P48432 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Sox2P48432 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox2P48432 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox2P48432 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.13□□□□□ -0.31
Sox2P48432 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.13□□□□□ -0.31
Sox2P48432 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Gm9385-201ENSMUST00000117563 472 ntBASIC13.13□□□□□ -0.31
Sox2P48432 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Mir8098-201ENSMUST00000184011 137 ntBASIC13.13□□□□□ -0.31
Sox2P48432 Gm27301-201ENSMUST00000184012 127 ntBASIC13.13□□□□□ -0.31
Sox2P48432 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms