Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.74■□□□□ 0.11
Sdc2P43407 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.74■□□□□ 0.11
Sdc2P43407 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
Sdc2P43407 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.74■□□□□ 0.11
Sdc2P43407 Gm8000-201ENSMUST00000188378 592 ntBASIC15.74■□□□□ 0.11
Sdc2P43407 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.74■□□□□ 0.11
Sdc2P43407 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.74■□□□□ 0.11
Sdc2P43407 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sdc2P43407 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.73■□□□□ 0.11
Sdc2P43407 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.73■□□□□ 0.11
Sdc2P43407 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.73■□□□□ 0.11
Sdc2P43407 Gm6443-201ENSMUST00000203599 874 ntBASIC15.73■□□□□ 0.11
Sdc2P43407 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Sdc2P43407 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.73■□□□□ 0.11
Sdc2P43407 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sdc2P43407 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sdc2P43407 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.72■□□□□ 0.11
Sdc2P43407 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sdc2P43407 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sdc2P43407 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Gm44608-201ENSMUST00000206827 855 ntBASIC15.72■□□□□ 0.11
Sdc2P43407 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.72■□□□□ 0.11
Sdc2P43407 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sdc2P43407 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sdc2P43407 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sdc2P43407 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sdc2P43407 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sdc2P43407 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Sdc2P43407 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Gm25911-201ENSMUST00000157621 56 ntBASIC15.71■□□□□ 0.11
Sdc2P43407 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.71■□□□□ 0.11
Sdc2P43407 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.71■□□□□ 0.11
Sdc2P43407 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms