Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Gm27301-201ENSMUST00000184012 127 ntBASIC11.59□□□□□ -0.55
Hist1h1aP43275 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.59□□□□□ -0.55
Hist1h1aP43275 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hist1h1aP43275 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.58□□□□□ -0.56
Hist1h1aP43275 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hist1h1aP43275 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Gm14140-201ENSMUST00000119999 995 ntBASIC11.57□□□□□ -0.56
Hist1h1aP43275 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Gm37230-201ENSMUST00000194491 818 ntBASIC11.57□□□□□ -0.56
Hist1h1aP43275 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Hist1h1aP43275 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hist1h1aP43275 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hist1h1aP43275 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms