Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RetP35546 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RetP35546 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.16□□□□□ -0.3
RetP35546 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
RetP35546 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RetP35546 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.15□□□□□ -0.3
RetP35546 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RetP35546 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.15□□□□□ -0.3
RetP35546 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.15□□□□□ -0.3
RetP35546 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.15□□□□□ -0.3
RetP35546 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.15□□□□□ -0.3
RetP35546 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RetP35546 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RetP35546 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RetP35546 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RetP35546 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RetP35546 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.15□□□□□ -0.31
RetP35546 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RetP35546 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RetP35546 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RetP35546 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RetP35546 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.14□□□□□ -0.31
RetP35546 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.14□□□□□ -0.31
RetP35546 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.14□□□□□ -0.31
RetP35546 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.14□□□□□ -0.31
RetP35546 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.14□□□□□ -0.31
RetP35546 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Gm24694-201ENSMUST00000180054 110 ntBASIC13.14□□□□□ -0.31
RetP35546 Gm27663-201ENSMUST00000184839 110 ntBASIC13.14□□□□□ -0.31
RetP35546 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.14□□□□□ -0.31
RetP35546 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.14□□□□□ -0.31
RetP35546 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.14□□□□□ -0.31
RetP35546 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
RetP35546 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RetP35546 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RetP35546 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
RetP35546 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RetP35546 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
RetP35546 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.13□□□□□ -0.31
RetP35546 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RetP35546 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.13□□□□□ -0.31
RetP35546 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RetP35546 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RetP35546 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms