Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a11P31650 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a11P31650 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a11P31650 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a11P31650 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.33□□□□□ -0.28
Slc6a11P31650 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Gm27437-201ENSMUST00000183429 107 ntBASIC13.33□□□□□ -0.28
Slc6a11P31650 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a11P31650 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a11P31650 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22065-201ENSMUST00000103753 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22066-201ENSMUST00000103761 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24932-201ENSMUST00000103763 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24115-201ENSMUST00000103799 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22190-201ENSMUST00000103827 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22191-201ENSMUST00000103831 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24721-201ENSMUST00000103849 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm28018-201ENSMUST00000103869 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm26399-201ENSMUST00000103937 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm5479-201ENSMUST00000160578 435 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25349-201ENSMUST00000177728 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm23616-201ENSMUST00000177797 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25871-201ENSMUST00000177816 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24752-201ENSMUST00000178240 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24496-201ENSMUST00000178287 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25649-201ENSMUST00000178476 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25548-201ENSMUST00000178681 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm23147-201ENSMUST00000178841 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm26095-201ENSMUST00000179270 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22171-201ENSMUST00000179283 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm23936-201ENSMUST00000179354 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm22619-201ENSMUST00000179516 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25255-201ENSMUST00000179579 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24755-201ENSMUST00000179691 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm26506-201ENSMUST00000179692 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm25086-201ENSMUST00000179931 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm23243-201ENSMUST00000180047 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24659-201ENSMUST00000180212 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm24169-201ENSMUST00000180244 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm23689-201ENSMUST00000180354 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm27359-201ENSMUST00000184153 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm27785-201ENSMUST00000184268 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm27466-201ENSMUST00000184396 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 Gm27703-201ENSMUST00000184836 110 ntBASIC13.32□□□□□ -0.28
Slc6a11P31650 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a11P31650 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a11P31650 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms