Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Gm14719-201ENSMUST00000121891 340 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.11■□□□□ 0.01
Irf8P23611 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Gm24420-201ENSMUST00000176676 59 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Gm8927-201ENSMUST00000181978 981 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Irf8P23611 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Gm3222-201ENSMUST00000071282 990 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Irf8P23611 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Auts2-212ENSMUST00000178555 309 ntBASIC15.1■□□□□ 0.01
Irf8P23611 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.1■□□□□ 0.01
Irf8P23611 Gm20949-201ENSMUST00000206478 952 ntBASIC15.1■□□□□ 0.01
Irf8P23611 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.1■□□□□ 0.01
Irf8P23611 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.1■□□□□ 0.01
Irf8P23611 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Irf8P23611 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf8P23611 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Irf8P23611 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.09■□□□□ 0.01
Irf8P23611 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Irf8P23611 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Irf8P23611 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Gm15240-201ENSMUST00000118156 720 ntBASIC15.09■□□□□ 0.01
Irf8P23611 Gm24694-201ENSMUST00000180054 110 ntBASIC15.09■□□□□ 0.01
Irf8P23611 Gm27663-201ENSMUST00000184839 110 ntBASIC15.09■□□□□ 0.01
Irf8P23611 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.09■□□□□ 0.01
Irf8P23611 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf8P23611 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.09■□□□□ 0.01
Irf8P23611 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms