Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hmga1P17095 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.27□□□□□ -0.12
Hmga1P17095 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.27□□□□□ -0.12
Hmga1P17095 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmga1P17095 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.27□□□□□ -0.13
Hmga1P17095 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.27□□□□□ -0.13
Hmga1P17095 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Gm17150-201ENSMUST00000165577 381 ntBASIC14.27□□□□□ -0.13
Hmga1P17095 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmga1P17095 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga1P17095 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.26□□□□□ -0.13
Hmga1P17095 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.26□□□□□ -0.13
Hmga1P17095 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.26□□□□□ -0.13
Hmga1P17095 Gm15429-201ENSMUST00000151268 798 ntBASIC14.26□□□□□ -0.13
Hmga1P17095 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.26□□□□□ -0.13
Hmga1P17095 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.26□□□□□ -0.13
Hmga1P17095 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga1P17095 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.26□□□□□ -0.13
Hmga1P17095 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmga1P17095 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga1P17095 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.25□□□□□ -0.13
Hmga1P17095 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hmga1P17095 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmga1P17095 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.25□□□□□ -0.13
Hmga1P17095 Gm6244-201ENSMUST00000178732 841 ntBASIC14.25□□□□□ -0.13
Hmga1P17095 Gm27892-201ENSMUST00000185017 106 ntBASIC14.25□□□□□ -0.13
Hmga1P17095 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmga1P17095 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmga1P17095 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmga1P17095 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hmga1P17095 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmga1P17095 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmga1P17095 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms