Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.15□□□□□ -0.3
Nid1P10493 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.15□□□□□ -0.3
Nid1P10493 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Gm18027-201ENSMUST00000218947 619 ntBASIC13.15□□□□□ -0.3
Nid1P10493 Dupd1-202ENSMUST00000224735 548 ntBASIC13.15□□□□□ -0.3
Nid1P10493 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nid1P10493 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.15□□□□□ -0.3
Nid1P10493 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nid1P10493 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.15□□□□□ -0.31
Nid1P10493 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nid1P10493 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.14□□□□□ -0.31
Nid1P10493 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.14□□□□□ -0.31
Nid1P10493 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Nid1P10493 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nid1P10493 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nid1P10493 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Nid1P10493 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Nid1P10493 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Nid1P10493 Gm25925-201ENSMUST00000158314 306 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gm24513-201ENSMUST00000174964 138 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gm24158-201ENSMUST00000175263 71 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gm29741-201ENSMUST00000192667 421 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gm37714-201ENSMUST00000194742 342 ntBASIC13.13□□□□□ -0.31
Nid1P10493 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Nid1P10493 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Matn2-206ENSMUST00000228570 2798 ntBASIC13.13□□□□□ -0.31
Nid1P10493 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.13□□□□□ -0.31
Nid1P10493 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms