Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm27572-201ENSMUST00000183702 255 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.04■□□□□ 0.48
Hoxc9P09633 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Gm29705-201ENSMUST00000212598 474 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Hoxc9P09633 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Hoxc9P09633 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc9P09633 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.04■□□□□ 0.48
Hoxc9P09633 Gm42853-201ENSMUST00000201273 1387 ntBASIC18.04■□□□□ 0.48
Hoxc9P09633 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.03■□□□□ 0.48
Hoxc9P09633 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Gm2445-201ENSMUST00000182798 989 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Gm5370-201ENSMUST00000187187 574 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Gm17330-201ENSMUST00000221047 165 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hoxc9P09633 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.03■□□□□ 0.48
Hoxc9P09633 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc9P09633 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Hoxc9P09633 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12203-201ENSMUST00000118235 598 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12209-201ENSMUST00000120089 596 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12403-201ENSMUST00000121384 959 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Gm18054-201ENSMUST00000207539 555 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxc9P09633 Itm2b-204ENSMUST00000228637 783 ntBASIC18.02■□□□□ 0.48
Hoxc9P09633 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc9P09633 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Hoxc9P09633 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Hoxc9P09633 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc9P09633 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms