Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa4P06798 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Hoxa4P06798 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxa4P06798 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Gm5279-201ENSMUST00000199575 745 ntBASIC13.77□□□□□ -0.21
Hoxa4P06798 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.77□□□□□ -0.21
Hoxa4P06798 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.77□□□□□ -0.21
Hoxa4P06798 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa4P06798 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Syt7-205ENSMUST00000224135 1557 ntBASIC13.76□□□□□ -0.21
Hoxa4P06798 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.76□□□□□ -0.21
Hoxa4P06798 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.76□□□□□ -0.21
Hoxa4P06798 Gm5354-201ENSMUST00000182417 973 ntBASIC13.76□□□□□ -0.21
Hoxa4P06798 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.76□□□□□ -0.21
Hoxa4P06798 Gm6218-201ENSMUST00000219812 628 ntBASIC13.76□□□□□ -0.21
Hoxa4P06798 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Hoxa4P06798 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hoxa4P06798 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hoxa4P06798 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxa4P06798 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms