Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Gm44414-201ENSMUST00000203660 2109 ntBASIC8.85□□□□□ -0.99
P06320 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC8.85□□□□□ -0.99
P06320 Cmtm5-203ENSMUST00000227441 610 ntBASIC8.85□□□□□ -0.99
P06320 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
P06320 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
P06320 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
P06320 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Gm43061-201ENSMUST00000198850 2241 ntBASIC8.85□□□□□ -0.99
P06320 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
P06320 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
P06320 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
P06320 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
P06320 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
P06320 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
P06320 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC8.84□□□□□ -0.99
P06320 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
P06320 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC8.84□□□□□ -0.99
P06320 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC8.84□□□□□ -0.99
P06320 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Gm8749-201ENSMUST00000117737 331 ntBASIC8.84□□□□□ -0.99
P06320 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Gm15593-201ENSMUST00000122085 1008 ntBASIC8.84□□□□□ -0.99
P06320 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
P06320 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC8.84□□□□□ -0.99
P06320 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC8.84□□□□□ -0.99
P06320 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
P06320 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
P06320 Gm38102-201ENSMUST00000192791 1935 ntBASIC8.84□□□□□ -1
P06320 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
P06320 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
P06320 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC8.83□□□□□ -1
P06320 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC8.83□□□□□ -1
P06320 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC8.83□□□□□ -1
P06320 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
P06320 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
P06320 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
P06320 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC8.83□□□□□ -1
P06320 Gm43417-201ENSMUST00000201586 5207 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms