Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.09□□□□□ -0.63
P01788 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01788 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
P01788 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.08□□□□□ -0.64
P01788 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01788 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
P01788 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.08□□□□□ -0.64
P01788 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P01788 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
P01788 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.08□□□□□ -0.64
P01788 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.08□□□□□ -0.64
P01788 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.08□□□□□ -0.64
P01788 Gm2651-201ENSMUST00000203560 838 ntBASIC11.08□□□□□ -0.64
P01788 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.08□□□□□ -0.64
P01788 Gm18195-201ENSMUST00000207604 706 ntBASIC11.08□□□□□ -0.64
P01788 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.08□□□□□ -0.64
P01788 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.08□□□□□ -0.64
P01788 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01788 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.08□□□□□ -0.64
P01788 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01788 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01788 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01788 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01788 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.07□□□□□ -0.64
P01788 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.07□□□□□ -0.64
P01788 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01788 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.07□□□□□ -0.64
P01788 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01788 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01788 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.07□□□□□ -0.64
P01788 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01788 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
P01788 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01788 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
P01788 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01788 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms