Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Apaf1O88879 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.2■□□□□ 0.5
Apaf1O88879 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.2■□□□□ 0.5
Apaf1O88879 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.2■□□□□ 0.5
Apaf1O88879 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Apaf1O88879 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.2■□□□□ 0.5
Apaf1O88879 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Apaf1O88879 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Gm6912-201ENSMUST00000117218 544 ntBASIC18.19■□□□□ 0.5
Apaf1O88879 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.19■□□□□ 0.5
Apaf1O88879 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.19■□□□□ 0.5
Apaf1O88879 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.19■□□□□ 0.5
Apaf1O88879 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Gm29741-201ENSMUST00000192667 421 ntBASIC18.19■□□□□ 0.5
Apaf1O88879 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.19■□□□□ 0.5
Apaf1O88879 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Apaf1O88879 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apaf1O88879 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Apaf1O88879 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Apaf1O88879 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Gm14928-201ENSMUST00000120198 477 ntBASIC18.18■□□□□ 0.5
Apaf1O88879 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Apaf1O88879 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Apaf1O88879 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apaf1O88879 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Apaf1O88879 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Apaf1O88879 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.17■□□□□ 0.5
Apaf1O88879 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.17■□□□□ 0.5
Apaf1O88879 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.17■□□□□ 0.5
Apaf1O88879 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Apaf1O88879 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.17■□□□□ 0.5
Apaf1O88879 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Apaf1O88879 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Apaf1O88879 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apaf1O88879 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms