Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pfdn2O70591 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.74□□□□□ -0.53
Pfdn2O70591 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn2O70591 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm27646-201ENSMUST00000183989 110 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.73□□□□□ -0.53
Pfdn2O70591 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn2O70591 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn2O70591 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.72□□□□□ -0.53
Pfdn2O70591 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.72□□□□□ -0.53
Pfdn2O70591 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.72□□□□□ -0.53
Pfdn2O70591 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn2O70591 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms