Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.36■□□□□ 0.05
Trdmt1O55055 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Gm12384-201ENSMUST00000119228 919 ntBASIC15.36■□□□□ 0.05
Trdmt1O55055 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trdmt1O55055 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdmt1O55055 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm23931-201ENSMUST00000103842 109 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm22331-201ENSMUST00000158066 136 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm8598-201ENSMUST00000221184 836 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.35■□□□□ 0.05
Trdmt1O55055 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.35■□□□□ 0.05
Trdmt1O55055 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdmt1O55055 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.34■□□□□ 0.05
Trdmt1O55055 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trdmt1O55055 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.34■□□□□ 0.05
Trdmt1O55055 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Trdmt1O55055 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.34■□□□□ 0.05
Trdmt1O55055 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Gm16177-201ENSMUST00000120728 718 ntBASIC15.34■□□□□ 0.05
Trdmt1O55055 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Gm6152-201ENSMUST00000151704 340 ntBASIC15.34■□□□□ 0.05
Trdmt1O55055 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.34■□□□□ 0.05
Trdmt1O55055 Gm43818-201ENSMUST00000200605 466 ntBASIC15.34■□□□□ 0.05
Trdmt1O55055 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdmt1O55055 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms