Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm2O35900 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.49□□□□□ -0.41
Lsm2O35900 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm2O35900 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm2O35900 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.48□□□□□ -0.41
Lsm2O35900 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.48□□□□□ -0.41
Lsm2O35900 Gm14859-201ENSMUST00000117752 357 ntBASIC12.48□□□□□ -0.41
Lsm2O35900 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Lsm2O35900 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.48□□□□□ -0.41
Lsm2O35900 Gm6376-201ENSMUST00000209407 580 ntBASIC12.48□□□□□ -0.41
Lsm2O35900 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.48□□□□□ -0.41
Lsm2O35900 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Lsm2O35900 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm2O35900 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm2O35900 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm2O35900 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Gm15483-201ENSMUST00000120338 456 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Gm34391-201ENSMUST00000203706 907 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Gm44608-201ENSMUST00000206827 855 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.47□□□□□ -0.41
Lsm2O35900 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.47□□□□□ -0.41
Lsm2O35900 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm2O35900 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm2O35900 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Lsm2O35900 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lsm2O35900 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm2O35900 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms