Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.79■□□□□ 0.44
Col15a1O35206 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col15a1O35206 Gm26927-201ENSMUST00000182385 965 ntBASIC17.79■□□□□ 0.44
Col15a1O35206 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col15a1O35206 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.79■□□□□ 0.44
Col15a1O35206 Gm37008-201ENSMUST00000195712 319 ntBASIC17.79■□□□□ 0.44
Col15a1O35206 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col15a1O35206 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.79■□□□□ 0.44
Col15a1O35206 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.79■□□□□ 0.44
Col15a1O35206 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.79■□□□□ 0.44
Col15a1O35206 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col15a1O35206 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col15a1O35206 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.78■□□□□ 0.44
Col15a1O35206 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col15a1O35206 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col15a1O35206 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Col15a1O35206 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.78■□□□□ 0.44
Col15a1O35206 Gm2445-201ENSMUST00000182798 989 ntBASIC17.78■□□□□ 0.44
Col15a1O35206 Gm38144-201ENSMUST00000192790 465 ntBASIC17.78■□□□□ 0.44
Col15a1O35206 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Col15a1O35206 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.77■□□□□ 0.44
Col15a1O35206 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.77■□□□□ 0.44
Col15a1O35206 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col15a1O35206 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col15a1O35206 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col15a1O35206 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Col15a1O35206 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Gm7584-201ENSMUST00000175829 940 ntBASIC17.77■□□□□ 0.43
Col15a1O35206 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.77■□□□□ 0.43
Col15a1O35206 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Col15a1O35206 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.77■□□□□ 0.43
Col15a1O35206 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.77■□□□□ 0.43
Col15a1O35206 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Gm24526-201ENSMUST00000082921 158 ntBASIC17.77■□□□□ 0.43
Col15a1O35206 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col15a1O35206 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.76■□□□□ 0.43
Col15a1O35206 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col15a1O35206 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Col15a1O35206 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Gm15770-201ENSMUST00000117498 584 ntBASIC17.76■□□□□ 0.43
Col15a1O35206 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.76■□□□□ 0.43
Col15a1O35206 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col15a1O35206 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.76■□□□□ 0.43
Col15a1O35206 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col15a1O35206 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Gm25261-201ENSMUST00000157416 134 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Gm10268-201ENSMUST00000085340 555 ntBASIC17.75■□□□□ 0.43
Col15a1O35206 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.75■□□□□ 0.43
Col15a1O35206 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col15a1O35206 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.74■□□□□ 0.43
Col15a1O35206 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col15a1O35206 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col15a1O35206 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms