Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ube3aO08759 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.17■□□□□ 0.02
Ube3aO08759 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.17■□□□□ 0.02
Ube3aO08759 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.17■□□□□ 0.02
Ube3aO08759 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube3aO08759 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ube3aO08759 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube3aO08759 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ube3aO08759 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm11594-201ENSMUST00000122313 162 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Gm12260-201ENSMUST00000122447 411 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm5177-201ENSMUST00000183092 997 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ube3aO08759 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Ube3aO08759 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.16■□□□□ 0.02
Ube3aO08759 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube3aO08759 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ube3aO08759 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Gm9727-201ENSMUST00000161387 555 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.15■□□□□ 0.02
Ube3aO08759 Gm27301-201ENSMUST00000184012 127 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Gm18041-201ENSMUST00000218210 618 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.15■□□□□ 0.02
Ube3aO08759 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.15■□□□□ 0.02
Ube3aO08759 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ube3aO08759 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ube3aO08759 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ube3aO08759 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube3aO08759 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube3aO08759 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Ube3aO08759 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ube3aO08759 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ube3aO08759 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.14■□□□□ 0.01
Ube3aO08759 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube3aO08759 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.14■□□□□ 0.01
Ube3aO08759 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ube3aO08759 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ube3aO08759 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube3aO08759 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ube3aO08759 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms